PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00254.1.p
Common NameMIMGU_mgv1a013120mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 231aa    MW: 26025.4 Da    PI: 5.7176
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00254.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.75.8e-154695255
                      HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L ++++Y++ Lq
  Migut.E00254.1.p 46 RSKHSVTEQRRRSKINERFQVLRKLIPHS----DQKRDTASFLLEVIQYVQFLQ 95
                      889*************************9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.45E-1842115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-2143111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.1644494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-124695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.47E-134699No hitNo description
SMARTSM003535.5E-1150100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MRSGKSNREE EEEEEDDEDS GTQKDANPSN NSTRDGKNSD KANAMRSKHS VTEQRRRSKI  60
NERFQVLRKL IPHSDQKRDT ASFLLEVIQY VQFLQQNVQN YEESYRPSSS EPTKLMPWRN  120
SHLRADPSST LHGKFDRGQH IPIESIDTPS DAQPSNGLNN QEDLIIEGGT IGISGVYSQR  180
LLNSFTQALE STGVDLSQAT ISVQINLGKR ANKDQSTSED LDQSQKRFKT *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006348644.11e-84PREDICTED: transcription factor BIM2-like isoform X2
SwissprotQ9CAA43e-71BIM2_ARATH; Transcription factor BIM2
TrEMBLA0A022Q5T01e-170A0A022Q5T0_ERYGU; Uncharacterized protein
STRINGSolyc05g011810.2.11e-82(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44262337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-62BES1-interacting Myc-like protein 2